STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2374Nitroreductase. (205 aa)    
Predicted Functional Partners:
THII_1234
Thiopurine S-methyltransferase (TPMT).
 
     0.871
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
 
      0.698
THII_1452
Bacteriocin biosynthesis cyclodehydratase domain-containing protein.
  
  
 0.669
THII_3905
biotin-(acetyl-CoA carboxylase) ligase.
  
    0.641
THII_2375
ATPase.
  
  
 0.602
THII_1927
CheW-like protein.
  
     0.586
THII_2736
Mannose-1-phosphate guanyltransferase.
  
  
 0.586
THII_3566
Metal-dependent hydrolase.
  
  
 0.586
THII_3728
Glutamate synthase.
     
 0.502
THII_1928
Response regulator receiver domain protein.
  
   
 0.473
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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