STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2399Hypothetical protein. (568 aa)    
Predicted Functional Partners:
THII_2398
Hypothetical protein.
 
    
0.723
THII_1524
NADP oxidoreductase.
   
   0.623
THII_1303
CDP-6-deoxy-delta-3,4-glucoseen reductase.
    
   0.574
THII_2208
Polyketide synthase.
  
 
 
 0.565
THII_0276
Clostripain.
  
 
  0.493
THII_2895
glucosyltransferase-I precursor.
  
     0.490
THII_3964
glucosyltransferase-I precursor.
  
     0.460
THII_0978
glucosyltransferase-I precursor.
  
     0.441
THII_2946
NADH-quinone oxidoreductase subunit M.
    
 
 0.436
THII_0879
ABC transporter ATP-binding protein.
  
     0.426
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.