STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheDChemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (209 aa)    
Predicted Functional Partners:
THII_2837
Chemotaxis protein CheC.
 
 0.999
THII_2446
Methyl-accepting chemotaxis protein.
 
  0.985
THII_2447
Methyl-accepting chemotaxis protein.
 
  0.983
THII_2175
Methyl-accepting chemotaxis protein.
 
 0.981
THII_3169
Methyl-accepting chemotaxis protein.
 
  0.980
THII_3210
Hypothetical protein.
 
 0.980
THII_0950
Methyl-accepting chemotaxis protein.
 
  0.979
THII_3946
Hypothetical protein.
 
  0.979
THII_2188
Methyl-accepting chemotaxis protein.
 
  0.977
THII_2444
Chemotaxis protein CheR.
  
 0.954
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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