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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2462Hydrogenase (NiFe) small subunit HydA. (313 aa)    
Predicted Functional Partners:
THII_3315
Nickel-dependent hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.999
THII_2459
Hydrogenase (NiFe) small subunit HydA.
 
  
 
0.966
THII_3692
Pyruvate:ferredoxin oxidoreductase, beta subunit.
   
 
 0.927
THII_3693
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
   
 
 0.927
THII_3694
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
   
 
 0.927
THII_0611
Sulfite reductase, dissimilatory-type subunit alpha.
     
  0.900
THII_0612
Sulfite reductase, dissimilatory-type subunit beta.
     
  0.900
THII_3592
Ni,Fe-hydrogenase maturation factor.
 
  
 0.864
THII_2460
Hypothetical protein.
 
   
 0.740
THII_2973
Hydrogenase accessory protein HypB.
 
  
 0.737
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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