STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2481General secretion pathway protein I. (139 aa)    
Predicted Functional Partners:
THII_1471
General secretion pathway protein J.
 
 
 0.995
THII_0255
Type II secretory pathway, component PulK.
 
 
 0.993
THII_3398
General secretion pathway protein H.
 
  
 0.923
THII_0590
General secretion pathway protein C.
 
  
 0.913
THII_0858
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
     
  0.900
THII_1045
Type II secretion system protein.
     
  0.900
THII_3894
Type II secretory pathway, component PulM; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
   
 0.857
THII_1272
General secretory pathway protein K.
  
 
 0.848
THII_2716
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.840
THII_0589
General secretion pathway protein D.
 
  
 0.834
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.