Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
THII_2491Periplasmic serine protease; Belongs to the peptidase S1C family. (480 aa)    
Predicted Functional Partners:
THII_2490
Positive regulator of sigma E, RseC/MucC.
  
  
 0.801
THII_2492
Glutaredoxin 2.
  
   0.795
THII_0906
ATPase AAA.
    
 0.737
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.662
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
 
  
 0.576
THII_1740
RIP metalloprotease RseP.
 
  
 0.549
THII_1954
Signal transduction histidine kinase.
  
  
 0.541
THII_2489
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.516
THII_1951
GAF sensor hybrid histidine kinase.
  
  
 0.495
THII_2488
Short-chain dehydrogenase.
   
 0.495
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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