STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2508Heterodisulfide reductase subunit B. (113 aa)    
Predicted Functional Partners:
THII_2278
Heterodisulfide reductase subunit A.
 
 
 0.990
THII_2277
Heterodisulfide reductase subunit A.
 
 
 0.931
THII_2279
Heterodisulfide reductase subunit C.
 
 
 0.849
THII_3315
Nickel-dependent hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.656
THII_1394
Formylmethanofuran dehydrogenase subunit B.
   
 
 0.620
THII_2554
Formylmethanofuran dehydrogenase subunit A.
    
   0.605
THII_1522
NAD-reducing hydrogenase hoxS subunit delta.
  
 
 0.581
THII_2509
ADP-ribosylglycohydrolase.
       0.520
THII_0833
Hypothetical protein.
  
 
   0.468
THII_2449
Hypothetical protein.
  
 
 0.465
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.