STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2554Formylmethanofuran dehydrogenase subunit A. (553 aa)    
Predicted Functional Partners:
THII_1394
Formylmethanofuran dehydrogenase subunit B.
 
 0.999
ffsA
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
 
 0.995
THII_0587
Formylmethanofuran dehydrogenase subunit C.
 
 
 0.994
THII_2278
Heterodisulfide reductase subunit A.
   
 
 0.978
THII_3690
NADPH-dependent glutamate synthase beta chain - like protein.
     
  0.900
THII_0118
Glutamate synthase, domain 2.
  
 
 0.848
THII_3728
Glutamate synthase.
  
 
 0.848
THII_2555
Histidine kinase.
       0.596
THII_2556
Nif-specific regulatory protein.
       0.550
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.533
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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