Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_2638Glycosyl transferase family protein. (325 aa)    
Predicted Functional Partners:
THII_2640
Glycosyl transferase group 1 family protein.
 
    0.921
THII_2641
Glycosyl transferase family protein.
 
    0.906
THII_2639
Glycosyl transferase group 2 family protein.
 
   
 0.838
THII_0055
Glycosyl transferase group 1.
 
    0.736
THII_0829
Lipopolysaccharide core biosynthesis glycosyltransferase.
 
     0.710
THII_1139
Hypothetical protein.
 
     0.708
THII_3922
Putative glycosyltransferase.
 
     0.697
THII_0597
Hypothetical protein.
 
    0.643
THII_0639
UDP-N-acetyl-D-mannosamine transferase; Belongs to the glycosyltransferase 26 family.
 
  
 0.617
THII_1707
Family 2 glycosyl transferase.
    
0.602
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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