STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2692Peptide ABC transporter substrate-binding protein. (500 aa)    
Predicted Functional Partners:
THII_0682
Glutathione ABC transporter permease.
 0.998
THII_0681
Binding-protein-dependent transporters inner membrane component.
 0.992
THII_1390
Peptide ABC transporter substrate-binding protein.
  
 
 0.519
THII_3910
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.484
THII_2693
Diguanylate cyclase.
  
    0.468
THII_2691
Methyltransferase.
  
    0.457
THII_3694
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
  
    0.448
THII_0767
Putative permease.
  
  
  0.436
cysA
Sulfate ABC transporter, ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
   
 
  0.420
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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