STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2696HflBKC-binding inner membrane protein; Belongs to the BI1 family. (244 aa)    
Predicted Functional Partners:
bamE
SmpA/OmlA family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
    0.582
THII_1295
Colicin V production protein.
  
    0.547
THII_3871
Putative membrane protein.
  
     0.544
surA
Molecular chaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.
  
   0.540
THII_0616
DsrC family protein; Part of a sulfur-relay system.
    
 0.525
htpX
Heat shock protein HtpX; Belongs to the peptidase M48B family.
  
  
 0.510
THII_2351
Putative aspartyl protease.
  
     0.510
THII_2697
Heme ABC transporter ATPase.
       0.499
THII_2698
Hypothetical protein.
       0.499
THII_2826
Generic methyl-transferase.
  
     0.472
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.