STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2700Bacterial type II secretion system protein. (144 aa)    
Predicted Functional Partners:
THII_2843
General secretion pathway protein G.
  
  
 
0.912
THII_0856
General secretion pathway protein G.
  
  
 
0.908
THII_0255
Type II secretory pathway, component PulK.
 
 
 0.823
THII_0589
General secretion pathway protein D.
 
  
 0.795
THII_2261
General secretion pathway protein D.
 
  
 0.794
THII_0854
General secretion pathway protein D.
 
  
 0.769
THII_1471
General secretion pathway protein J.
 
 
 0.670
THII_1272
General secretory pathway protein K.
 
 
 0.650
THII_2481
General secretion pathway protein I.
 
  
 0.638
THII_2520
Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.613
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.