Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_2707Chromosome partitioning ATPase. (351 aa)    
Predicted Functional Partners:
THII_2706
Hypothetical protein.
       0.773
THII_2705
Hypothetical protein.
       0.714
THII_2922
Hypothetical protein.
  
 
 0.670
THII_3234
Cobyrinic acid a,c-diamide synthase.
  
     0.633
THII_2708
DNA methylase N-4; Belongs to the N(4)/N(6)-methyltransferase family.
       0.625
THII_1957
DNA segregation ATPase FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.585
THII_2639
Glycosyl transferase group 2 family protein.
  
 
 0.578
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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