Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_2764FAD-binding protein. (479 aa)    
Predicted Functional Partners:
THII_0985
FAD-binding protein.
  
  0.989
THII_1716
Hypothetical protein.
 
 0.987
THII_0534
Malate synthase A; Belongs to the malate synthase family.
  
 
 0.914
THII_1889
Serine--pyruvate transaminase.
  
 
 0.905
THII_3430
Hydrolase.
    
 0.903
THII_3701
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.903
THII_0533
Isocitrate lyase.
     
 0.902
THII_0211
Fe-S oxidoreductase.
  
 0.856
THII_2765
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.773
THII_1524
NADP oxidoreductase.
   
 0.664
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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