STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2771ABC transporter ATP-binding protein. (543 aa)    
Predicted Functional Partners:
THII_1050
Amino acid adenylation enzyme/thioester reductase family protein.
 
  
 0.917
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.827
THII_2783
tubC protein.
 
  
 0.815
THII_2773
GTPase.
 
     0.747
THII_2775
Band 7 protein.
 
     0.691
THII_2208
Polyketide synthase.
 
  
 0.667
THII_2209
Polyketide synthase.
 
  
 0.642
THII_2202
Polyketide synthase.
 
   
 0.592
THII_0588
Glycine betaine/proline transport system substrate-binding protein.
     
  0.540
THII_0767
Putative permease.
     
  0.540
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.