STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2797Hypothetical protein. (193 aa)    
Predicted Functional Partners:
THII_2798
Hypothetical protein.
 
     0.937
THII_2796
AMP-dependent synthetase and ligase.
 
  
 0.884
THII_2794
Acyl carrier protein.
 
     0.834
THII_2799
Carbamoyltransferase.
       0.773
THII_2795
Hypothetical protein; Belongs to the methyltransferase superfamily.
       0.757
THII_0899
ATPase AAA.
  
     0.630
THII_2791
Actin/actin family protein.
       0.626
THII_2792
Hypothetical protein.
       0.626
THII_2793
Cadmium-transporting ATPase.
       0.626
THII_2379
Hypothetical protein.
  
     0.593
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.