STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2798Hypothetical protein. (227 aa)    
Predicted Functional Partners:
THII_2797
Hypothetical protein.
 
     0.937
THII_2796
AMP-dependent synthetase and ligase.
 
     0.836
THII_2794
Acyl carrier protein.
 
     0.788
THII_2799
Carbamoyltransferase.
       0.773
THII_2795
Hypothetical protein; Belongs to the methyltransferase superfamily.
       0.757
THII_2791
Actin/actin family protein.
       0.626
THII_2792
Hypothetical protein.
       0.626
THII_2793
Cadmium-transporting ATPase.
       0.626
THII_2800
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
     0.616
THII_2788
Putative Zn-dependent oxidoreductase.
  
    0.523
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.