STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2842Hypothetical protein. (170 aa)    
Predicted Functional Partners:
THII_2843
General secretion pathway protein G.
  
    0.697
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
   
   0.457
THII_3142
O-antigen polymerase.
 
     0.430
THII_0172
Hypothetical protein.
  
     0.429
THII_1847
Signal transduction histidine kinase.
  
 
   0.419
THII_0962
DNA repair helicase RAD25.
  
 
  0.415
THII_0535
Sigma-70 region 4 domain-containing protein.
 
     0.412
THII_3420
ABC transporter ATP-binding protein, putative.
 
    0.401
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.