STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2848Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
THII_2849
Hypothetical protein.
       0.779
THII_2850
Putative permease.
  
    0.779
THII_3728
Glutamate synthase.
  
  
 0.535
THII_2851
TM2 protein.
       0.463
THII_2852
RDD family protein.
       0.463
THII_2845
Hypothetical protein.
       0.426
THII_2846
Hypothetical protein.
       0.426
THII_2847
Hypothetical protein.
       0.426
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.