STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2852RDD family protein. (246 aa)    
Predicted Functional Partners:
THII_2854
Integral membrane protein.
    0.984
THII_2855
Hypothetical protein.
 
    0.895
THII_3632
Hypothetical protein.
 
    0.869
THII_2856
Hypothetical protein.
 
     0.851
THII_0130
Hypothetical protein.
 
    0.850
THII_2851
TM2 protein.
 
    0.812
THII_0970
Conserved repeat protein.
 
    0.642
THII_2471
Phage shock protein A.
  
    0.608
THII_2853
Hypothetical protein.
       0.550
THII_2848
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
       0.463
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.