STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2875Nitrite reductase. (581 aa)    
Predicted Functional Partners:
THII_0335
Nitric-oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family.
 
 0.997
THII_0334
Nitric-oxide reductase.
 
 
  0.995
THII_2881
AsnC family transcriptional regulator.
 
    0.948
THII_1673
Putative nitrite oxidoreductase/nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.942
THII_1674
Respiratory nitrate reductase beta chain.
  
 0.936
THII_1778
Anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.932
THII_2880
Heme biosynthesis protein.
 
  
 0.918
THII_2877
Cytochrome d1 heme subunit.
 
   0.915
THII_1783
Major facilitator superfamily transporter.
     
 0.913
THII_2876
C-type cytochrome c55x.
 
  
 0.902
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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