STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2885Cytochrome c553. (230 aa)    
Predicted Functional Partners:
THII_2884
Nitrous oxide reductase.
 
   
 0.827
THII_2893
ABC-2 type transporter.
 
     0.795
THII_2891
ABC transporter.
 
     0.757
THII_1692
Flavocytochrome c subunit fccA.
 
   
 0.746
THII_0851
Cytochrome c.
 
  
 0.742
THII_2888
Copper ABC transporter substrate-binding protein.
 
     0.716
THII_2892
Hypothetical protein.
 
     0.707
THII_1691
Flavoprotein subunit of flavocytochrome c sulfide dehydrogenase.
   
 
 0.676
THII_2890
Ferredoxin-type protein, NapH/MauN family.
 
  
 0.673
THII_2889
Ferredoxin.
 
   
 0.636
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.