rpmA protein (Thioploca ingrica) - STRING interaction network

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Score

rpmA

50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (99 aa)

Predicted Functional Partners:

rplU

0.999

rplS

0.998

rplC

0.997

rpmB

0.997

rplT

0.997

rplQ

0.996

rpsJ

0.996

rpsO

0.996

rpsB

0.996

rpmG

0.996

Your Current Organism:

Thioploca ingrica

NCBI taxonomy Id: 40754
Other names: T. ingrica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplC	rplQ	THII_0312	THII_0287	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L17.	0.997
rplC	rplS	THII_0312	THII_3882	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.994
rplC	rplT	THII_0312	THII_2368	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.997
rplC	rplU	THII_0312	THII_2916	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.995
rplC	rpmA	THII_0312	THII_2917	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.997
rplC	rpmB	THII_0312	THII_1565	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.995
rplC	rpmG	THII_0312	THII_3341	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.993
rplC	rpsB	THII_0312	THII_1747	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.997
rplC	rpsJ	THII_0312	THII_0313	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplC	rpsO	THII_0312	THII_1180	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.990
rplQ	rplC	THII_0287	THII_0312	50S ribosomal protein L17.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.997
rplQ	rplS	THII_0287	THII_3882	50S ribosomal protein L17.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.997
rplQ	rplT	THII_0287	THII_2368	50S ribosomal protein L17.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.995
rplQ	rplU	THII_0287	THII_2916	50S ribosomal protein L17.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
rplQ	rpmA	THII_0287	THII_2917	50S ribosomal protein L17.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.996
rplQ	rpmB	THII_0287	THII_1565	50S ribosomal protein L17.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.993
rplQ	rpmG	THII_0287	THII_3341	50S ribosomal protein L17.	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.993
rplQ	rpsB	THII_0287	THII_1747	50S ribosomal protein L17.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.994
rplQ	rpsJ	THII_0287	THII_0313	50S ribosomal protein L17.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.997
rplQ	rpsO	THII_0287	THII_1180	50S ribosomal protein L17.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.996