STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2968PAS domain S-box. (1238 aa)    
Predicted Functional Partners:
THII_3857
Diguanylate cyclase (GGDEF) domain-containing protein.
 
   0.799
THII_2524
Sulfotransferase family protein.
  
     0.772
THII_3283
PDK repeat-containing protein.
  
     0.772
THII_0260
Conserved repeat protein.
  
     0.770
THII_2510
Membrane protease subunit, stomatin/prohibitin.
  
     0.769
THII_1868
Hypothetical protein.
  
     0.749
THII_2379
Hypothetical protein.
  
     0.747
THII_1194
Hypothetical protein.
  
     0.743
THII_1869
Hypothetical protein.
  
     0.738
THII_1652
Sulfotransferase family protein.
  
     0.720
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.