STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2970Hypothetical protein. (574 aa)    
Predicted Functional Partners:
THII_2315
Von Willebrand factor type A.
 
    0.610
THII_1574
TIR domain-containing protein.
 
    0.530
THII_2435
NAD(+) ADP-ribosyltransferase.
 
 
 0.521
THII_3504
WD40 repeat-containing protein.
  
    0.506
THII_2996
WD repeat-containing protein.
 
    0.470
THII_2208
Polyketide synthase.
 
 
 
 0.466
THII_2120
WD40 repeat-containing protein.
  
    0.459
THII_1991
ADP-ribosylglycohydrolase.
  
     0.455
THII_2297
Hypothetical protein.
 
   
 0.452
THII_2123
2-acyl-glycerophospho-ethanolamine acyltransferase.
 
 
 
 0.438
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.