STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2976PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein. (1278 aa)    
Predicted Functional Partners:
THII_2168
Signal transduction histidine kinase.
 
 
 0.915
THII_0636
Signal transduction histidine kinase.
 
 
0.898
THII_2294
PAS domain S-box.
 
 
 0.860
THII_1954
Signal transduction histidine kinase.
  
 
 0.858
THII_3834
Sensory transduction histidine kinase.
 
 
 0.838
THII_2963
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.834
THII_0050
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.814
THII_2528
Signal transduction histidine kinase.
  
 
 0.765
THII_1036
Signal transduction histidine kinase.
 
 
0.760
THII_1913
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.750
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.