STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2979Glycosyl transferase, group 1. (366 aa)    
Predicted Functional Partners:
THII_2978
Putative glycosyltransferase.
 
    0.832
THII_2077
Glycosyl transferase family 1.
  
     0.720
THII_0447
Hypothetical protein.
 
     0.710
THII_0446
Glycosyl transferase, family 2.
  
    0.655
THII_1539
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.559
glgB
1,4-alpha-glucan-branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.546
THII_2977
Bacterial type II secretion system protein E.
       0.546
THII_2208
Polyketide synthase.
  
 
 0.502
THII_0760
Glycosyltransferase, group 2 family protein.
  
  
 0.442
THII_0822
Bacterial sugar transferase.
 
  
 0.442
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.