STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2979Glycosyl transferase, group 1. (366 aa)    
Predicted Functional Partners:
THII_2978
Putative glycosyltransferase.
 
    0.834
THII_2077
Glycosyl transferase family 1.
  
     0.720
THII_0447
Hypothetical protein.
 
     0.709
THII_0446
Glycosyl transferase, family 2.
  
    0.652
THII_1539
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.547
glgB
1,4-alpha-glucan-branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.546
THII_2977
Bacterial type II secretion system protein E.
       0.546
THII_0822
Bacterial sugar transferase.
 
  
 0.448
THII_1867
Tetratricopeptide repeat protein.
  
 
   0.417
THII_0760
Glycosyltransferase, group 2 family protein.
  
  
 0.411
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.