STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2996WD repeat-containing protein. (1062 aa)    
Predicted Functional Partners:
THII_1846
Sodium/hydrogen exchanger family protein.
   
 0.980
THII_1693
Ankyrin.
  
 0.971
THII_3678
Ankyrin.
  
 0.971
THII_3046
ADP-ribosylation/crystallin J1.
   
 0.949
THII_0964
TPR repeat containing protein.
 
 
 0.905
THII_2080
TPR repeat containing protein.
 
 
 0.885
THII_3788
Hypothetical protein.
 
 
 0.885
THII_1006
Hypothetical protein.
 
 
 0.879
THII_1820
Calmodulin.
  
 0.873
THII_1406
ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family.
    
 0.872
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.