STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_3017Short-chain dehydrogenase/reductase SDR. (245 aa)    
Predicted Functional Partners:
THII_3018
FAD linked oxidase domain-containing protein.
 
  
 0.950
THII_3052
UbiA prenyltransferase family protein; Belongs to the UbiA prenyltransferase family.
 
    0.823
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.675
THII_2208
Polyketide synthase.
  
 
 0.673
THII_0012
Polyketide synthase family protein.
  
 
 0.626
THII_1050
Amino acid adenylation enzyme/thioester reductase family protein.
 
  
 0.534
THII_2123
2-acyl-glycerophospho-ethanolamine acyltransferase.
   
 
 0.529
THII_3016
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.522
THII_0674
AMP-dependent synthetase/ligase.
 
 
 
 0.473
purL
Phosphoribosylformylglycinamidine synthase, single chain form; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
       0.459
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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