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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3022NADH:flavin oxidoreductase. (364 aa)    
Predicted Functional Partners:
THII_2489
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
 
    0.855
THII_3800
Electron transfer flavoprotein beta subunit.
  
 
 0.754
THII_1717
Alcohol dehydrogenase zinc-binding domain protein.
  
 0.529
THII_1674
Respiratory nitrate reductase beta chain.
    
   0.521
THII_3799
Electron transfer flavoprotein alpha subunit.
   
 
 0.499
THII_2123
2-acyl-glycerophospho-ethanolamine acyltransferase.
  
  
 0.454
THII_2208
Polyketide synthase.
  
  
 0.453
THII_0035
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
    0.424
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.420
THII_2724
Translation elongation factor Tu.
   
    0.420
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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