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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3031Von Willebrand factor type A. (777 aa)    
Predicted Functional Partners:
THII_2424
CbbQ/NirQ/NorQ domain-containing protein.
 
  
 0.862
THII_1970
ATPase family protein associated with various cellular activities (AAA).
 
  
 0.854
THII_0336
ATPase AAA.
 
  
 0.850
THII_3312
Ribulose bisphosphate carboxylase, small chain.
 
   
 0.780
THII_0273
Hypothetical protein.
 
     0.766
cbbL
Ribulose bisphosphate carboxylase form I, large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
   
 0.681
THII_0335
Nitric-oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.557
THII_0334
Nitric-oxide reductase.
  
  
 0.540
THII_3032
Putative membrane-bound metal-dependent hydrolase.
       0.533
THII_2888
Copper ABC transporter substrate-binding protein.
   
    0.457
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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