Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| THII_0485 | THII_1313 | THII_0485 | THII_1313 | Putative macrolide efflux ABC transporter, ATP-binding protein. | Lipoprotein releasing system transmembrane protein. | 0.628 |
| THII_0485 | lolA | THII_0485 | THII_3039 | Putative macrolide efflux ABC transporter, ATP-binding protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.780 |
| THII_1313 | THII_0485 | THII_1313 | THII_0485 | Lipoprotein releasing system transmembrane protein. | Putative macrolide efflux ABC transporter, ATP-binding protein. | 0.628 |
| THII_1313 | bamA | THII_1313 | THII_1739 | Lipoprotein releasing system transmembrane protein. | Surface antigen D15; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.737 |
| THII_1313 | bamD | THII_1313 | THII_1544 | Lipoprotein releasing system transmembrane protein. | Competence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.560 |
| THII_1313 | lolA | THII_1313 | THII_3039 | Lipoprotein releasing system transmembrane protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.791 |
| THII_1313 | lolD | THII_1313 | THII_1314 | Lipoprotein releasing system transmembrane protein. | Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.991 |
| THII_1313 | pal | THII_1313 | THII_0765 | Lipoprotein releasing system transmembrane protein. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.709 |
| THII_1957 | lolA | THII_1957 | THII_3039 | DNA segregation ATPase FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.620 |
| THII_3040 | THII_3041 | THII_3040 | THII_3041 | Hypothetical protein. | Hypothetical protein. | 0.773 |
| THII_3040 | lolA | THII_3040 | THII_3039 | Hypothetical protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.671 |
| THII_3041 | THII_3040 | THII_3041 | THII_3040 | Hypothetical protein. | Hypothetical protein. | 0.773 |
| THII_3041 | lolA | THII_3041 | THII_3039 | Hypothetical protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.671 |
| bamA | THII_1313 | THII_1739 | THII_1313 | Surface antigen D15; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Lipoprotein releasing system transmembrane protein. | 0.737 |
| bamA | bamD | THII_1739 | THII_1544 | Surface antigen D15; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Competence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.991 |
| bamA | lolA | THII_1739 | THII_3039 | Surface antigen D15; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.716 |
| bamA | lptD | THII_1739 | THII_3161 | Surface antigen D15; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Organic solvent tolerance protein OstA; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.804 |
| bamA | pal | THII_1739 | THII_0765 | Surface antigen D15; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.673 |
| bamD | THII_1313 | THII_1544 | THII_1313 | Competence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Lipoprotein releasing system transmembrane protein. | 0.560 |
| bamD | bamA | THII_1544 | THII_1739 | Competence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Surface antigen D15; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.991 |
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