Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
THII_3043Sensor histidine kinase/response regulator. (581 aa)    
Predicted Functional Partners:
THII_0937
Response regulator receiver and Hpt phospho transfer protein.
 
 
   0.977
THII_0540
Response regulator receiver protein.
 
 0.922
THII_3415
Histidine kinase-like protein.
 
 
 0.773
THII_0878
Response regulator receiver.
 
 
 0.727
THII_2296
MCP methyltransferase, CheR-type.
 
      0.693
THII_0877
Sensory box/GGDEF family protein.
 
 
 0.680
THII_1541
Diguanylate cyclase.
 
   
 0.676
THII_2168
Signal transduction histidine kinase.
 
 
0.605
THII_0443
Response regulator receiver protein.
 
 
0.596
THII_3044
Invasin.
   
   0.577
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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