STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3050Hypothetical protein. (82 aa)    
Predicted Functional Partners:
THII_3049
DNA polymerase III subunit delta.
       0.773
THII_3051
Putative spermidine synthase with an N-terminal membrane domain.
       0.757
THII_3052
UbiA prenyltransferase family protein; Belongs to the UbiA prenyltransferase family.
  
  
 0.745
THII_3048
Hypothetical protein.
       0.675
THII_2017
Hypothetical protein.
   
    0.625
THII_2166
NAD(P)H:quinone oxidoreductase, type IV; Belongs to the WrbA family.
   
    0.614
THII_1299
poly(R)-hydroxyalkanoic acid synthase.
 
     0.535
THII_0838
Polyhydroxyalkonate synthesis repressor, PhaR.
 
     0.517
THII_3250
NAD-glutamate dehydrogenase.
  
     0.499
THII_0432
Succinate dehydrogenase membrane anchor subunit.
  
     0.449
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.