Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_3062Sensor kinase protein. (458 aa)    
Predicted Functional Partners:
THII_3063
Response regulator receiver:transcriptional regulatory protein, C-terminal.
 
 0.969
THII_3449
Chemotaxis protein CheY.
 
 0.780
THII_1570
Transcriptional regulator.
 
 0.753
THII_2168
Signal transduction histidine kinase.
  
 
 0.727
THII_1983
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain.
 
 
 0.706
THII_0878
Response regulator receiver.
 
 
 0.679
THII_1624
Transcriptional regulator.
 
 
 0.639
THII_0636
Signal transduction histidine kinase.
  
 
 0.610
THII_3034
Chemotaxis protein CheY.
 
 0.605
THII_3834
Sensory transduction histidine kinase.
  
 
 0.595
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.