Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
THII_3076 | THII_3077 | THII_3076 | THII_3077 | Hypothetical protein. | Hypothetical protein. | 0.655 |
THII_3076 | THII_3078 | THII_3076 | THII_3078 | Hypothetical protein. | Hypothetical protein. | 0.655 |
THII_3076 | THII_3079 | THII_3076 | THII_3079 | Hypothetical protein. | Hypothetical protein. | 0.655 |
THII_3076 | THII_3082 | THII_3076 | THII_3082 | Hypothetical protein. | Hypothetical protein. | 0.439 |
THII_3076 | nadE | THII_3076 | THII_3080 | Hypothetical protein. | NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.680 |
THII_3076 | thiG | THII_3076 | THII_3081 | Hypothetical protein. | Thiamine biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.629 |
THII_3077 | THII_3076 | THII_3077 | THII_3076 | Hypothetical protein. | Hypothetical protein. | 0.655 |
THII_3077 | THII_3078 | THII_3077 | THII_3078 | Hypothetical protein. | Hypothetical protein. | 0.773 |
THII_3077 | THII_3079 | THII_3077 | THII_3079 | Hypothetical protein. | Hypothetical protein. | 0.773 |
THII_3077 | THII_3082 | THII_3077 | THII_3082 | Hypothetical protein. | Hypothetical protein. | 0.508 |
THII_3077 | THII_3083 | THII_3077 | THII_3083 | Hypothetical protein. | Hypothetical protein. | 0.435 |
THII_3077 | nadE | THII_3077 | THII_3080 | Hypothetical protein. | NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.773 |
THII_3077 | thiG | THII_3077 | THII_3081 | Hypothetical protein. | Thiamine biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.741 |
THII_3078 | THII_3076 | THII_3078 | THII_3076 | Hypothetical protein. | Hypothetical protein. | 0.655 |
THII_3078 | THII_3077 | THII_3078 | THII_3077 | Hypothetical protein. | Hypothetical protein. | 0.773 |
THII_3078 | THII_3079 | THII_3078 | THII_3079 | Hypothetical protein. | Hypothetical protein. | 0.773 |
THII_3078 | THII_3082 | THII_3078 | THII_3082 | Hypothetical protein. | Hypothetical protein. | 0.508 |
THII_3078 | THII_3083 | THII_3078 | THII_3083 | Hypothetical protein. | Hypothetical protein. | 0.435 |
THII_3078 | nadE | THII_3078 | THII_3080 | Hypothetical protein. | NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.773 |
THII_3078 | thiG | THII_3078 | THII_3081 | Hypothetical protein. | Thiamine biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.741 |
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