STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3085Nitrogen fixation protein NifZ. (148 aa)    
Predicted Functional Partners:
nifW
Nitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
   
 0.965
THII_3087
Hypothetical protein.
 
 
   0.958
THII_3738
Nitrogen fixation protein NifM.
   
 0.876
THII_3088
Homocitrate synthase NifV; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
  
 0.865
THII_1817
Nitrogen fixation protein.
 
  
 0.863
THII_1811
NifY protein.
 
  
 0.846
THII_1815
Dinitrogenase iron-molybdenum cofactor biosynthesis protein.
 
   
 0.838
THII_3125
NifQ family protein.
 
  
 0.833
THII_1808
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
   
 0.828
THII_1809
Nitrogen fixation protein NifT.
 
  
 0.828
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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