STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3090Receptor protein kinase-like protein. (1808 aa)    
Predicted Functional Partners:
THII_2869
Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
   0.518
THII_0903
D-Ala-D-Ala carboxypeptidase.
  
     0.447
THII_2054
Large extracellular alpha-helical protein.
  
     0.444
THII_1786
Fibro-slime family protein.
  
   0.437
THII_1651
Hypothetical protein.
  
     0.428
THII_1422
Hypothetical protein.
  
     0.421
THII_1638
Hypothetical protein.
  
     0.418
THII_2155
Hypothetical protein.
  
     0.412
THII_1423
RTX family exoprotein.
  
     0.402
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.