STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3100Acetyltransferase. (248 aa)    
Predicted Functional Partners:
THII_3176
Acetyltransferase.
   
0.746
lpxA
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
 
 0.691
THII_2208
Polyketide synthase.
  
 
 0.651
THII_3101
Hypothetical protein.
       0.603
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.580
THII_0741
Glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
   0.568
THII_1738
Outer membrane protein OmpH; Belongs to the skp family.
  
  
 0.537
THII_1710
Putative acetyltransferase.
 
   
 0.517
THII_1259
Polysialic acid capsule expression protein.
 
  
 0.514
THII_3198
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
   0.493
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.