STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3113ABC transporter. (235 aa)    
Predicted Functional Partners:
THII_3114
Hypothetical protein.
 
 0.997
THII_3112
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.967
THII_0486
ABC transporter permease.
 
 
 0.879
THII_0488
ABC transporter permease.
 
 
 0.876
THII_1784
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component.
 
      0.847
msbA
ATP-binding protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
    
0.768
THII_0681
Binding-protein-dependent transporters inner membrane component.
 
 
    0.663
THII_0139
Hypothetical protein.
 
 
 0.655
THII_1313
Lipoprotein releasing system transmembrane protein.
 
 0.616
THII_0809
Permease.
  
 
 0.537
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.