STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3121DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (385 aa)    
Predicted Functional Partners:
THII_3119
Polysaccharide biosynthesis protein CapD.
  
 0.957
THII_3120
Sugar transferase.
 
  
 0.912
THII_3123
Group 1 glycosyl transferase.
  
    0.812
THII_1539
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.802
THII_3122
Hypothetical protein.
       0.773
THII_0743
Oxidoreductase domain protein.
  
 0.600
THII_1347
NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.546
THII_0760
Glycosyltransferase, group 2 family protein.
  
  
 0.536
THII_0638
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.478
THII_1699
NAD-dependent epimerase/dehydratase.
  
  
 0.454
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.