STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3128Flavodoxin/nitric oxide synthase. (422 aa)    
Predicted Functional Partners:
THII_3127
Ferredoxin IV.
 
  
 0.947
THII_3133
Nitric oxide reductase; Belongs to the FAD-dependent oxidoreductase family.
 
  
 0.939
THII_3130
Nitrogenase cofactor biosynthesis protein NifB.
 
  
 0.855
THII_1782
Nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.843
THII_3126
Ferredoxin.
 
  
 0.833
THII_3129
Hypothetical protein.
  
    0.781
THII_3125
NifQ family protein.
 
  
 0.716
THII_0066
Hypothetical protein.
  
  
 0.624
THII_2340
Rubredoxin.
 
  
 0.502
THII_2153
Hemerythrin HHE cation binding region.
  
  
 0.453
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.