STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3132Hypothetical protein. (541 aa)    
Predicted Functional Partners:
THII_3064
Cartilage oligomeric matrix protein.
  
 
   0.764
THII_2498
Hypothetical protein.
  
 
   0.755
THII_3115
Hypothetical protein.
  
 
   0.751
THII_3477
Peptidase domain-containing protein.
  
     0.702
THII_0318
Hypothetical protein.
  
   0.679
THII_2503
Alpha/beta hydrolase fold protein.
  
 
 
 0.665
THII_3045
Hypothetical protein.
  
   0.654
THII_1704
Sulfotransferase.
  
    0.620
THII_0786
Hypothetical protein.
  
    0.590
THII_3462
Rifampin ADP-ribosyl transferase; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.590
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.