STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3139Serine/threonine protein kinase with WD40 repeats. (351 aa)    
Predicted Functional Partners:
THII_0328
Serine/threonine protein kinase.
 
      0.880
THII_1496
NB-ARC domain-containing protein.
 
      0.736
THII_3140
WD40 repeat-containing protein.
 
    
0.730
THII_0190
Apoptotic protease activating factor 1.
 
     0.679
THII_2080
TPR repeat containing protein.
  
 
  0.493
THII_0964
TPR repeat containing protein.
  
 
 0.489
THII_3788
Hypothetical protein.
  
 
  0.473
THII_3678
Ankyrin.
  
 
  0.462
rpmD
50S ribosomal protein L30.
   
  0.454
THII_3141
Periplasmic ligand-binding sensor domain-containing protein.
   
   0.451
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.