STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3139Serine/threonine protein kinase with WD40 repeats. (351 aa)    
Predicted Functional Partners:
THII_0328
Serine/threonine protein kinase.
 
 
    0.881
THII_1496
NB-ARC domain-containing protein.
 
      0.736
THII_3140
WD40 repeat-containing protein.
 
    
0.731
THII_0190
Apoptotic protease activating factor 1.
 
     0.680
THII_2080
TPR repeat containing protein.
  
  0.519
THII_0964
TPR repeat containing protein.
  0.517
THII_2686
Hypothetical protein.
   
 0.509
THII_3788
Hypothetical protein.
  
  0.499
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.495
THII_3141
Periplasmic ligand-binding sensor domain-containing protein.
   
   0.467
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.