STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3203Hypothetical protein. (134 aa)    
Predicted Functional Partners:
THII_3176
Acetyltransferase.
      0.911
THII_1345
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
    0.884
THII_0741
Glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.672
THII_3204
Hypothetical protein.
       0.610
THII_3205
Hypothetical protein.
       0.610
THII_3206
HAD-superfamily hydrolase.
       0.610
THII_1539
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.571
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.519
THII_3057
Mannose-1-phosphate guanyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.468
THII_3198
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.460
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.