STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3247CsbD family protein; Belongs to the UPF0337 (CsbD) family. (68 aa)    
Predicted Functional Partners:
THII_3246
Transport-associated.
 
  
 0.961
THII_3248
Hypothetical protein.
       0.773
THII_1335
Hypothetical protein.
  
    0.500
THII_1337
Hypothetical protein.
  
    0.500
THII_3245
Hypothetical protein.
  
    0.500
THII_2962
Fucose 4-O-acetylase.
   
    0.442
THII_0462
Transmembrane protein.
  
  
 0.435
THII_0799
Protein involved in polysaccharide export.
   
    0.422
THII_1326
Capsular polysaccharide export protein.
   
    0.422
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.