STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3250NAD-glutamate dehydrogenase. (175 aa)    
Predicted Functional Partners:
THII_0276
Clostripain.
    
 
 0.789
THII_3773
Aminoacyl-histidine dipeptidase.
   
    0.756
THII_3050
Hypothetical protein.
  
     0.499
THII_3728
Glutamate synthase.
      
 0.493
THII_0257
Glutamine synthetase, type I.
      
 0.457
argD
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
  
 0.442
THII_1530
4-hydroxybenzoyl-CoA thioesterase.
  
    0.427
THII_2901
Thioesterase.
  
    0.427
THII_3251
Cytochrome c biogenesis protein; Possible subunit of a heme lyase.
       0.427
THII_3252
TPR repeat containing protein.
       0.427
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.