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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3264HoxW protein. (179 aa)    
Predicted Functional Partners:
THII_1522
NAD-reducing hydrogenase hoxS subunit delta.
 
  
 0.844
THII_1521
NADP oxidoreductase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.837
THII_1523
Hydrogen dehydrogenase.
 
   
 0.804
THII_1524
NADP oxidoreductase.
 
   
 0.732
THII_3262
Anaerobic dimethyl sulfoxide reductase subunit B.
  
  
 0.585
THII_0915
Ni,Fe-hydrogenase III large subunit.
  
  
 0.564
THII_3263
Anaerobic dehydrogenase-like component.
       0.550
THII_3261
Molybdopterin oxidoreductase.
     
 0.534
THII_3265
Mov34/MPN/PAD-1 family protein.
 
     0.524
THII_3260
Hypothetical protein.
       0.498
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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