STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3310RuBisCO operon transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (308 aa)    
Predicted Functional Partners:
cbbL
Ribulose bisphosphate carboxylase form I, large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
   
 0.787
THII_3312
Ribulose bisphosphate carboxylase, small chain.
 
   
 0.664
THII_0657
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.655
THII_3309
Hypothetical protein.
       0.574
THII_3308
GCN5-like N-acetyltransferase.
  
  
 0.563
THII_3307
Hypothetical protein.
       0.562
THII_3728
Glutamate synthase.
  
  
 0.535
THII_3306
Hypothetical protein.
       0.471
THII_3305
Hypothetical protein.
       0.424
THII_3304
Hypothetical protein.
  
    0.408
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.