STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3379Hypothetical protein. (258 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.804
THII_1050
Amino acid adenylation enzyme/thioester reductase family protein.
 
  
 0.563
THII_3042
Two-component sensor serine/threonine kinase.
   
 
 0.518
THII_3905
biotin-(acetyl-CoA carboxylase) ligase.
     
 0.518
THII_2123
2-acyl-glycerophospho-ethanolamine acyltransferase.
  
  
 0.506
THII_0636
Signal transduction histidine kinase.
   
  
 0.502
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.502
THII_2168
Signal transduction histidine kinase.
   
  
 0.499
THII_2208
Polyketide synthase.
     
 0.498
THII_3378
NHL repeat containing protein.
       0.457
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.